iSeq 100

Next-generation sequencing (NGS) is easier and more affordable with the compact Illumina iSeq 100 System. The iSeq 100 System combines complementary metal-oxidesemi conductor (CMOS) technology with the proven accuracy of Illumina sequencing by synthesis (SBS) chemistry to deliver high-accuracy data with fast turnaround times. The iSeq 100 System generates up to 1.2 Gb of data per run in 19 hours and delivers the high resolution and analytical sensitivity needed for detection of rare variants and transcripts.

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iSeq 100 System performance parameters
Run configuration	Reads passing filter (PF)/run	Output	Quality scores	Run time
1 × 36 bp	4M	144 Mb	> 85%	~ 9 hours
1 × 50 bp	4M	200 Mb	> 85%	~ 9 hours
1 × 75 bp	4M	300 Mb	> 80%	~ 10 hours
2 × 75 bp	4M	600 Mb	> 80%	~ 13 hours
2 × 150 bp	4M	1.2 Gb	> 80%	~ 19 hours

UNIQUE PRODUCT BENEFITS

FAST LIBRARY PREPARATION

A The iSeq 100 System is compatible with the full suite of Illumina library preparation kits. With the Nextera™ XT and Illumina DNA Prep Library Kits, researchers can prepare multiplexed libraries in 3-4 hours for small genome and direct long-range amplicon sequencing. In addition, the AmpliSeq™ for Illumina Targeted Resequencing Solution offers expertly designed content.

WIDE RANGE OF APPLICATIONS

With a maximum output of 2.0 Gb, the iSeq 100System offers rapid, multiplexed sequencing for a range of applications:

Small whole-genome sequencing
Targeted resequencing AmpliSeq for Illumina Targeted Resequencing
Long-range PCR
De novo sequencing
Gene editing validation
Metagenomics (16S rRNA-sequencing)
Targeted mRNA sequencing
Small RNA sequencing
Multiple genome assessment
Human leukocyte antigen (HLA) sequence based typing

iSeq 100 System applications and run configurations
Application	Samples/run	Run time
Small genome sequencing 5-10 Mb genomes, 30× coverage 2 × 150 bp	1-8	~ 19 hours
Targeted gene expression profiling Up to 500 targets 1 × 50 bp	1-48	~ 9 hours
Targeted amplicon sequencing Up to 3000 amplicons 2 × 250 bp	1-48	~ 19 hours

EASY, FLEXIBLE DATA ANALYSIS

The iSeq 100 System offers several data analysis options, including onboard and cloud-based solutions. Local Run Manager, a fully integrated onboard analysis software, features modular architecture to support current and future assays. Local Run Manager supports sequencing run planning, library and run tracking with audit trails, and onboard data analysis module integration. While Local Run Manager runs on the instrument computer, users can monitor run progress and view analysis results from remote computers connected to the same network. After a sequencing run is complete, Local Run Manager automatically launches data analysis using one of the application-specific analysis modules.

iSeq 100 System specifications
Parameter	Specification
Instrument configuration	RFID tracking for consumables
Instrument control computer (Internal)a	Base Unit: Celeron J1900 2 GHz Quad Core CPU Memory: 8 GB RAM Hard Drive: 240 GB SSD Operating System: Windows 10 loT Enterprise
Operating environment	Temperature: 15°C to 30°C (22.5°C ± 7.5°C) Humidity: noncondensing 20%–80% relative humidity Altitude: Less than 2000 m (6500 ft) Air Quality: pollution degree rating of II Ventilation: up to 2048 BTU/hr @ 600 W For indoor use only
Light emitting diode (LED)	520 nm, 1.5 W/cm2 at image plane
Dimensions	W×D×H (raised monitor): 30.5 cm × 33 cm × 42.5 cm (12.0 in × 13.0 in × 16.7 in) Weight: 16 kg (35 lbs) Crated Weight: 21 kg (47 lbs)

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